| /* The MIT License |
| |
| Copyright (c) 2008, 2009, 2011 by Attractive Chaos <attractor@live.co.uk> |
| |
| Permission is hereby granted, free of charge, to any person obtaining |
| a copy of this software and associated documentation files (the |
| "Software"), to deal in the Software without restriction, including |
| without limitation the rights to use, copy, modify, merge, publish, |
| distribute, sublicense, and/or sell copies of the Software, and to |
| permit persons to whom the Software is furnished to do so, subject to |
| the following conditions: |
| |
| The above copyright notice and this permission notice shall be |
| included in all copies or substantial portions of the Software. |
| |
| THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, |
| EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF |
| MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND |
| NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS |
| BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN |
| ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN |
| CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE |
| SOFTWARE. |
| */ |
| |
| #ifndef __AC_KHASH_H |
| #define __AC_KHASH_H |
| |
| #define AC_VERSION_KHASH_H "0.2.8" |
| |
| typedef uint32_t khint32_t; |
| typedef uint64_t khint64_t; |
| |
| typedef khint32_t khint_t; |
| typedef khint_t khiter_t; |
| |
| #define __ac_isempty(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&2) |
| #define __ac_isdel(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&1) |
| #define __ac_iseither(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&3) |
| #define __ac_set_isdel_false(flag, i) (flag[i>>4]&=~(1ul<<((i&0xfU)<<1))) |
| #define __ac_set_isempty_false(flag, i) (flag[i>>4]&=~(2ul<<((i&0xfU)<<1))) |
| #define __ac_set_isboth_false(flag, i) (flag[i>>4]&=~(3ul<<((i&0xfU)<<1))) |
| #define __ac_set_isdel_true(flag, i) (flag[i>>4]|=1ul<<((i&0xfU)<<1)) |
| |
| #define __ac_fsize(m) ((m) < 16? 1 : (m)>>4) |
| |
| #define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(x)) |
| |
| static inline khint_t __ac_X31_hash_string(const char *s) |
| { |
| khint_t h = (khint_t)*s; |
| if (h) for (++s ; *s; ++s) h = (h << 5) - h + (khint_t)*s; |
| return h; |
| } |
| |
| #define kh_str_hash_func(key) __ac_X31_hash_string(key) |
| #define kh_str_hash_equal(a, b) (strcmp(a, b) == 0) |
| |
| static const double __ac_HASH_UPPER = 0.77; |
| |
| #define __KHASH_TYPE(name, khkey_t, khval_t) \ |
| typedef struct { \ |
| khint_t n_buckets, size, n_occupied, upper_bound; \ |
| khint32_t *flags; \ |
| khkey_t *keys; \ |
| khval_t *vals; \ |
| } kh_##name##_t; |
| |
| #define __KHASH_PROTOTYPES(name, khkey_t, khval_t) \ |
| extern kh_##name##_t *kh_init_##name(void); \ |
| extern void kh_destroy_##name(kh_##name##_t *h); \ |
| extern void kh_clear_##name(kh_##name##_t *h); \ |
| extern khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key); \ |
| extern int kh_resize_##name(kh_##name##_t *h, khint_t new_n_buckets); \ |
| extern khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret); \ |
| extern void kh_del_##name(kh_##name##_t *h, khint_t x); |
| |
| #define __KHASH_IMPL(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \ |
| SCOPE kh_##name##_t *kh_init_##name(void) { \ |
| return (kh_##name##_t*)xcalloc(1, sizeof(kh_##name##_t)); \ |
| } \ |
| SCOPE void kh_destroy_##name(kh_##name##_t *h) \ |
| { \ |
| if (h) { \ |
| free((void *)h->keys); free(h->flags); \ |
| free((void *)h->vals); \ |
| free(h); \ |
| } \ |
| } \ |
| SCOPE void kh_clear_##name(kh_##name##_t *h) \ |
| { \ |
| if (h && h->flags) { \ |
| memset(h->flags, 0xaa, __ac_fsize(h->n_buckets) * sizeof(khint32_t)); \ |
| h->size = h->n_occupied = 0; \ |
| } \ |
| } \ |
| SCOPE khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key) \ |
| { \ |
| if (h->n_buckets) { \ |
| khint_t k, i, last, mask, step = 0; \ |
| mask = h->n_buckets - 1; \ |
| k = __hash_func(key); i = k & mask; \ |
| last = i; \ |
| while (!__ac_isempty(h->flags, i) && (__ac_isdel(h->flags, i) || !__hash_equal(h->keys[i], key))) { \ |
| i = (i + (++step)) & mask; \ |
| if (i == last) return h->n_buckets; \ |
| } \ |
| return __ac_iseither(h->flags, i)? h->n_buckets : i; \ |
| } else return 0; \ |
| } \ |
| SCOPE int kh_resize_##name(kh_##name##_t *h, khint_t new_n_buckets) \ |
| { /* This function uses 0.25*n_buckets bytes of working space instead of [sizeof(key_t+val_t)+.25]*n_buckets. */ \ |
| khint32_t *new_flags = NULL; \ |
| khint_t j = 1; \ |
| { \ |
| kroundup32(new_n_buckets); \ |
| if (new_n_buckets < 4) new_n_buckets = 4; \ |
| if (h->size >= (khint_t)(new_n_buckets * __ac_HASH_UPPER + 0.5)) j = 0; /* requested size is too small */ \ |
| else { /* hash table size to be changed (shrink or expand); rehash */ \ |
| new_flags = (khint32_t*)xmalloc(__ac_fsize(new_n_buckets) * sizeof(khint32_t)); \ |
| if (!new_flags) return -1; \ |
| memset(new_flags, 0xaa, __ac_fsize(new_n_buckets) * sizeof(khint32_t)); \ |
| if (h->n_buckets < new_n_buckets) { /* expand */ \ |
| khkey_t *new_keys = (khkey_t*)xrealloc((void *)h->keys, new_n_buckets * sizeof(khkey_t)); \ |
| if (!new_keys) return -1; \ |
| h->keys = new_keys; \ |
| if (kh_is_map) { \ |
| khval_t *new_vals = (khval_t*)xrealloc((void *)h->vals, new_n_buckets * sizeof(khval_t)); \ |
| if (!new_vals) return -1; \ |
| h->vals = new_vals; \ |
| } \ |
| } /* otherwise shrink */ \ |
| } \ |
| } \ |
| if (j) { /* rehashing is needed */ \ |
| for (j = 0; j != h->n_buckets; ++j) { \ |
| if (__ac_iseither(h->flags, j) == 0) { \ |
| khkey_t key = h->keys[j]; \ |
| khval_t val; \ |
| khint_t new_mask; \ |
| new_mask = new_n_buckets - 1; \ |
| if (kh_is_map) val = h->vals[j]; \ |
| __ac_set_isdel_true(h->flags, j); \ |
| while (1) { /* kick-out process; sort of like in Cuckoo hashing */ \ |
| khint_t k, i, step = 0; \ |
| k = __hash_func(key); \ |
| i = k & new_mask; \ |
| while (!__ac_isempty(new_flags, i)) i = (i + (++step)) & new_mask; \ |
| __ac_set_isempty_false(new_flags, i); \ |
| if (i < h->n_buckets && __ac_iseither(h->flags, i) == 0) { /* kick out the existing element */ \ |
| { khkey_t tmp = h->keys[i]; h->keys[i] = key; key = tmp; } \ |
| if (kh_is_map) { khval_t tmp = h->vals[i]; h->vals[i] = val; val = tmp; } \ |
| __ac_set_isdel_true(h->flags, i); /* mark it as deleted in the old hash table */ \ |
| } else { /* write the element and jump out of the loop */ \ |
| h->keys[i] = key; \ |
| if (kh_is_map) h->vals[i] = val; \ |
| break; \ |
| } \ |
| } \ |
| } \ |
| } \ |
| if (h->n_buckets > new_n_buckets) { /* shrink the hash table */ \ |
| h->keys = (khkey_t*)xrealloc((void *)h->keys, new_n_buckets * sizeof(khkey_t)); \ |
| if (kh_is_map) h->vals = (khval_t*)xrealloc((void *)h->vals, new_n_buckets * sizeof(khval_t)); \ |
| } \ |
| free(h->flags); /* free the working space */ \ |
| h->flags = new_flags; \ |
| h->n_buckets = new_n_buckets; \ |
| h->n_occupied = h->size; \ |
| h->upper_bound = (khint_t)(h->n_buckets * __ac_HASH_UPPER + 0.5); \ |
| } \ |
| return 0; \ |
| } \ |
| SCOPE khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret) \ |
| { \ |
| khint_t x; \ |
| if (h->n_occupied >= h->upper_bound) { /* update the hash table */ \ |
| if (h->n_buckets > (h->size<<1)) { \ |
| if (kh_resize_##name(h, h->n_buckets - 1) < 0) { /* clear "deleted" elements */ \ |
| *ret = -1; return h->n_buckets; \ |
| } \ |
| } else if (kh_resize_##name(h, h->n_buckets + 1) < 0) { /* expand the hash table */ \ |
| *ret = -1; return h->n_buckets; \ |
| } \ |
| } /* TODO: to implement automatically shrinking; resize() already support shrinking */ \ |
| { \ |
| khint_t k, i, site, last, mask = h->n_buckets - 1, step = 0; \ |
| x = site = h->n_buckets; k = __hash_func(key); i = k & mask; \ |
| if (__ac_isempty(h->flags, i)) x = i; /* for speed up */ \ |
| else { \ |
| last = i; \ |
| while (!__ac_isempty(h->flags, i) && (__ac_isdel(h->flags, i) || !__hash_equal(h->keys[i], key))) { \ |
| if (__ac_isdel(h->flags, i)) site = i; \ |
| i = (i + (++step)) & mask; \ |
| if (i == last) { x = site; break; } \ |
| } \ |
| if (x == h->n_buckets) { \ |
| if (__ac_isempty(h->flags, i) && site != h->n_buckets) x = site; \ |
| else x = i; \ |
| } \ |
| } \ |
| } \ |
| if (__ac_isempty(h->flags, x)) { /* not present at all */ \ |
| h->keys[x] = key; \ |
| __ac_set_isboth_false(h->flags, x); \ |
| ++h->size; ++h->n_occupied; \ |
| *ret = 1; \ |
| } else if (__ac_isdel(h->flags, x)) { /* deleted */ \ |
| h->keys[x] = key; \ |
| __ac_set_isboth_false(h->flags, x); \ |
| ++h->size; \ |
| *ret = 2; \ |
| } else *ret = 0; /* Don't touch h->keys[x] if present and not deleted */ \ |
| return x; \ |
| } \ |
| SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x) \ |
| { \ |
| if (x != h->n_buckets && !__ac_iseither(h->flags, x)) { \ |
| __ac_set_isdel_true(h->flags, x); \ |
| --h->size; \ |
| } \ |
| } |
| |
| #define KHASH_DECLARE(name, khkey_t, khval_t) \ |
| __KHASH_TYPE(name, khkey_t, khval_t) \ |
| __KHASH_PROTOTYPES(name, khkey_t, khval_t) |
| |
| #define KHASH_INIT2(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \ |
| __KHASH_TYPE(name, khkey_t, khval_t) \ |
| __KHASH_IMPL(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) |
| |
| #define KHASH_INIT(name, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \ |
| KHASH_INIT2(name, static inline, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) |
| |
| /* Other convenient macros... */ |
| |
| /*! @function |
| @abstract Test whether a bucket contains data. |
| @param h Pointer to the hash table [khash_t(name)*] |
| @param x Iterator to the bucket [khint_t] |
| @return 1 if containing data; 0 otherwise [int] |
| */ |
| #define kh_exist(h, x) (!__ac_iseither((h)->flags, (x))) |
| |
| /*! @function |
| @abstract Get key given an iterator |
| @param h Pointer to the hash table [khash_t(name)*] |
| @param x Iterator to the bucket [khint_t] |
| @return Key [type of keys] |
| */ |
| #define kh_key(h, x) ((h)->keys[x]) |
| |
| /*! @function |
| @abstract Get value given an iterator |
| @param h Pointer to the hash table [khash_t(name)*] |
| @param x Iterator to the bucket [khint_t] |
| @return Value [type of values] |
| @discussion For hash sets, calling this results in segfault. |
| */ |
| #define kh_val(h, x) ((h)->vals[x]) |
| |
| /*! @function |
| @abstract Alias of kh_val() |
| */ |
| #define kh_value(h, x) ((h)->vals[x]) |
| |
| /*! @function |
| @abstract Get the start iterator |
| @param h Pointer to the hash table [khash_t(name)*] |
| @return The start iterator [khint_t] |
| */ |
| #define kh_begin(h) (khint_t)(0) |
| |
| /*! @function |
| @abstract Get the end iterator |
| @param h Pointer to the hash table [khash_t(name)*] |
| @return The end iterator [khint_t] |
| */ |
| #define kh_end(h) ((h)->n_buckets) |
| |
| /*! @function |
| @abstract Get the number of elements in the hash table |
| @param h Pointer to the hash table [khash_t(name)*] |
| @return Number of elements in the hash table [khint_t] |
| */ |
| #define kh_size(h) ((h)->size) |
| |
| /*! @function |
| @abstract Get the number of buckets in the hash table |
| @param h Pointer to the hash table [khash_t(name)*] |
| @return Number of buckets in the hash table [khint_t] |
| */ |
| #define kh_n_buckets(h) ((h)->n_buckets) |
| |
| /*! @function |
| @abstract Iterate over the entries in the hash table |
| @param h Pointer to the hash table [khash_t(name)*] |
| @param kvar Variable to which key will be assigned |
| @param vvar Variable to which value will be assigned |
| @param code Block of code to execute |
| */ |
| #define kh_foreach(h, kvar, vvar, code) { khint_t __i; \ |
| for (__i = kh_begin(h); __i != kh_end(h); ++__i) { \ |
| if (!kh_exist(h,__i)) continue; \ |
| (kvar) = kh_key(h,__i); \ |
| (vvar) = kh_val(h,__i); \ |
| code; \ |
| } } |
| |
| /*! @function |
| @abstract Iterate over the values in the hash table |
| @param h Pointer to the hash table [khash_t(name)*] |
| @param vvar Variable to which value will be assigned |
| @param code Block of code to execute |
| */ |
| #define kh_foreach_value(h, vvar, code) { khint_t __i; \ |
| for (__i = kh_begin(h); __i != kh_end(h); ++__i) { \ |
| if (!kh_exist(h,__i)) continue; \ |
| (vvar) = kh_val(h,__i); \ |
| code; \ |
| } } |
| |
| static inline khint_t __kh_oid_hash(const unsigned char *oid) |
| { |
| khint_t hash; |
| memcpy(&hash, oid, sizeof(hash)); |
| return hash; |
| } |
| |
| #define __kh_oid_cmp(a, b) (hashcmp(a, b) == 0) |
| |
| KHASH_INIT(sha1, const unsigned char *, void *, 1, __kh_oid_hash, __kh_oid_cmp) |
| typedef kh_sha1_t khash_sha1; |
| |
| KHASH_INIT(sha1_pos, const unsigned char *, int, 1, __kh_oid_hash, __kh_oid_cmp) |
| typedef kh_sha1_pos_t khash_sha1_pos; |
| |
| #endif /* __AC_KHASH_H */ |
