pack-objects: fix performance issues on packing large deltas

Let's start with some background about oe_delta_size() and
oe_set_delta_size(). If you already know, skip the next paragraph.

These two are added in 0aca34e826 (pack-objects: shrink delta_size
field in struct object_entry - 2018-04-14) to help reduce 'struct
object_entry' size. The delta size field in this struct is reduced to
only contain max 1MB. So if any new delta is produced and larger than
1MB, it's dropped because we can't really save such a large size
anywhere. Fallback is provided in case existing packfiles already have
large deltas, then we can retrieve it from the pack.

While this should help small machines repacking large repos without
large deltas (i.e. less memory pressure), dropping large deltas during
the delta selection process could end up with worse pack files. And if
existing packfiles already have >1MB delta and pack-objects is
instructed to not reuse deltas, all of them will be dropped on the
floor, and the resulting pack would be definitely bigger.

There is also a regression in terms of CPU/IO if we have large on-disk
deltas because fallback code needs to parse the pack every time the
delta size is needed and just access to the mmap'd pack data is enough
for extra page faults when memory is under pressure.

Both of these issues were reported on the mailing list. Here's some
numbers for comparison.

    Version  Pack (MB)  MaxRSS(kB)  Time (s)
    -------  ---------  ----------  --------
     2.17.0     5498     43513628    2494.85
     2.18.0    10531     40449596    4168.94

This patch provides a better fallback that is

- cheaper in terms of cpu and io because we won't have to read
  existing pack files as much

- better in terms of pack size because the pack heuristics is back to
  2.17.0 time, we do not drop large deltas at all

If we encounter any delta (on-disk or created during try_delta phase)
that is larger than the 1MB limit, we stop using delta_size_ field for
this because it can't contain such size anyway. A new array of delta
size is dynamically allocated and can hold all the deltas that 2.17.0
can. This array only contains delta sizes that delta_size_ can't
contain.

With this, we do not have to drop deltas in try_delta() anymore. Of
course the downside is we use slightly more memory, even compared to
2.17.0. But since this is considered an uncommon case, a bit more
memory consumption should not be a problem.

Delta size limit is also raised from 1MB to 16MB to better cover
common case and avoid that extra memory consumption (99.999% deltas in
this reported repo are under 12MB; Jeff noted binary artifacts topped
out at about 3MB in some other private repos). Other fields are
shuffled around to keep this struct packed tight. We don't use more
memory in common case even with this limit update.

A note about thread synchronization. Since this code can be run in
parallel during delta searching phase, we need a mutex. The realloc
part in packlist_alloc() is not protected because it only happens
during the object counting phase, which is always single-threaded.

Access to e->delta_size_ (and by extension
pack->delta_size[e - pack->objects]) is unprotected as before, the
thread scheduler in pack-objects must make sure "e" is never updated
by two different threads.

The area under the new lock is as small as possible, avoiding locking
at all in common case, since lock contention with high thread count
could be expensive (most blobs are small enough that delta compute
time is short and we end up taking the lock very often). The previous
attempt to always hold a lock in oe_delta_size() and
oe_set_delta_size() increases execution time by 33% when repacking
linux.git with with 40 threads.

Reported-by: Elijah Newren <newren@gmail.com>
Helped-by: Elijah Newren <newren@gmail.com>
Helped-by: Jeff King <peff@peff.net>
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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README.md

Git - fast, scalable, distributed revision control system

Git is a fast, scalable, distributed revision control system with an unusually rich command set that provides both high-level operations and full access to internals.

Git is an Open Source project covered by the GNU General Public License version 2 (some parts of it are under different licenses, compatible with the GPLv2). It was originally written by Linus Torvalds with help of a group of hackers around the net.

Please read the file INSTALL for installation instructions.

Many Git online resources are accessible from https://git-scm.com/ including full documentation and Git related tools.

See Documentation/gittutorial.txt to get started, then see Documentation/giteveryday.txt for a useful minimum set of commands, and Documentation/git-.txt for documentation of each command. If git has been correctly installed, then the tutorial can also be read with man gittutorial or git help tutorial, and the documentation of each command with man git-<commandname> or git help <commandname>.

CVS users may also want to read Documentation/gitcvs-migration.txt (man gitcvs-migration or git help cvs-migration if git is installed).

The user discussion and development of Git take place on the Git mailing list -- everyone is welcome to post bug reports, feature requests, comments and patches to git@vger.kernel.org (read Documentation/SubmittingPatches for instructions on patch submission). To subscribe to the list, send an email with just “subscribe git” in the body to majordomo@vger.kernel.org. The mailing list archives are available at https://public-inbox.org/git/, http://marc.info/?l=git and other archival sites.

The maintainer frequently sends the “What's cooking” reports that list the current status of various development topics to the mailing list. The discussion following them give a good reference for project status, development direction and remaining tasks.

The name “git” was given by Linus Torvalds when he wrote the very first version. He described the tool as “the stupid content tracker” and the name as (depending on your mood):

  • random three-letter combination that is pronounceable, and not actually used by any common UNIX command. The fact that it is a mispronunciation of “get” may or may not be relevant.
  • stupid. contemptible and despicable. simple. Take your pick from the dictionary of slang.
  • “global information tracker”: you're in a good mood, and it actually works for you. Angels sing, and a light suddenly fills the room.
  • “goddamn idiotic truckload of sh*t”: when it breaks